Nuclear and chloroplastic SNP markers for genetic studies of timber origin for Hymenaea trees
MEYER-SAND, Barbara R. V.
Universidade Estadual Paulista Júlio de Mesquita Filho = São Paulo State University [UNESP]
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Universidade Estadual Paulista Júlio de Mesquita Filho = São Paulo State University [UNESP]
Language
en
Article de revue
This item was published in
Conservation Genetics Resources. 2019, vol. 11, n° 3, p. 329-331
Springer
English Abstract
We developed nuclear and chloroplastic single nucleotide polymorphism (SNP) and INDEL (insertion/deletion) markers using restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing to set up a ...Read more >
We developed nuclear and chloroplastic single nucleotide polymorphism (SNP) and INDEL (insertion/deletion) markers using restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing to set up a genetic tracking method of the geographical origin of Hymenaea sp. From two initial sets of 358 and 32 loci used to genotype at least 94 individuals, a final set of 75 nSNPs, 50 cpSNPs and 6 INDELs identifying significant population structure was developed.Read less <
English Keywords
DNA-fingerprints
geographical origin
MiSeq
RADSeq
Origin
Hal imported